Saturday, December 15, 2012

data corruption: PacIOOS CTD

Gordon Walker (PacIOOS, University of Hawai`i), Mike Shoemaker (AOML Electronics Tech) and myself, Mike Jankulak (AOML, University of Miami) are working together to access the data stored on the PacIOOS CTD.

Gordon purchased a replacement Y-Cable from SeaBird which arrived in Honolulu on December 6th.  He then shipped it to Shoe, who connected it to the recovered CTD so that I could communicate with it.

Communications are possible but the memory appears to be corrupted.  Attempts to download the stored data have so far yielded nothing but garbage data past September 6th, 2011.  This point is just more than a year earlier than the sensor's recovery so we are hoping that more data can be recovered.  Gordon will be consulting with his SeaBird contacts about this issue.

Mike J+

Friday, November 16, 2012

awaiting Y-cable from SeaBird

A brief update:  Gordon Walker (PacIOOS, University of Hawai`i) has placed an order with SeaBird for a replacement Y-Cable that we will be able to use here in Miami for connecting to the PacIOOS CTD and downloading the data from its on-board memory.

Mike J+

Wednesday, October 10, 2012

diagnosis: a dissolved connector pin

Mike Shoemaker makes this report about the likely cause of the station's power problems:
These are the preliminary results of the examination of returned instruments from Saipan. The attached pictures are from the PAC IOOS CT main power Y-cable which provides power to the instrument and the attached water pump along with communication. The connector that attaches to the fish bite cable adapter has had a pin arced off. This pin is still embedded in the adapter. I speculate that this may have been caused by bringing the instrument up to the surface to disconnect from the station and connect to a laptop for download then being re connected without properly drying the connectors and lubing with silicon to form a proper seal. In addition to these problems the strain relief connector is missing from the main fish bite cable, this also could be the cause of the seawater intrusion as that the main fish bite cable megs out @ infinity but when the adapter is attached it megs out @ 1.5meg.

The BIC _DP cable megs out @ anywhere from 400meg to 600meg depending on which of the 4 conductors that you attach to and the CTD_DP cable megs out @ 200meg across all 4 conductors. I speculate that from the earlier e-mail from Mr. Benavente about the three prong spears used by local fisherman that the cables were punctured from these and that seawater intrusion has caused these high resistance short circuits.

My next step will be to see if Mr. Bishop has any of the Y-cables left from the Sea Bird CTD's that we transferred to his group to test the PAC IOOS CT and down load Gordon Walker's data along with testing the other returned underwater instruments. That is unless Gordon can expedite a shipment of a cable from his spares.
As Shoe explains, we now believe with a high degree of certainty that the station power problems were caused by a connector failure.  The ground pin from the PacIOOS Y-Cable is missing in the connector that attaches to the CREWS pigtail adapter.  Both this Y-Cable (a SeaBird part) and the pigtail adapter (custom-made by CREWS) must be replaced.

Next steps will include downloading the PacIOOS on-board memory and re-testing of the "brain" components.  The underwater sensors that have been retrieved, since they were deployed on the station for more than a year, will now be sent back to their manufacturers for evaluation and recalibration, and the station will next go live with its alternative set of sensors (most of which have been in storage in Saipan since August of 2011).

Clicking on any of the images below should load a full-sized version.

Mike J+



Tuesday, October 2, 2012

station equipment reaches Miami

Following the last blog update on September 5th (which mentioned how the station had been completely offline since August 24th), the station resumed its brief sunlit periods of activity for a few hours a day until September 19th.  The last coherent report from the PacIOOS CTD, however, occurred on September 10th.

I'm not sure of the details of timing and personnel, but I believe David Benavente and Steven Johnson were involved in an operation on September 27th, 2012, to retrieve all of the station underwater sensors and cables as well as the "brain" package.  These, along with the "groundtruth" CT, were packed up and shipped to AOML in Miami on September 28th.  The shipment arrived here on October 1st, 2012.

David Benavente had made the following observation about removing the instruments from the station:
So just thought you should know. While I was attempting to shut down the PACIOOS Seabird I removed the male/female plugs to connect it to the serial port. I noticed that one of the copper nodes on the male side had corroded off. Im not sure if its the ground wire, but I thought I should let you know. I decided to remove the batteries from the PACIOOS CTD so that it cannot continue to collect data.
Mike Shoemaker will be leading the effort to diagnose the power losses that have plagued the station in the past few months.

Mike J+

Thursday, September 6, 2012

new plan: equipment recovery for analysis in Miami

As of today, September 5th, 2012, the decision has been made to recover all of the station equipment and ship it to Miami for analysis and repair.  An alternative plan to have Mike Shoemaker fly out to Saipan and work on site with Steven and David has been set aside due to budgeting and logistics difficulties.

After the last blog update, the station continued to come alive for a few hours a day until August 24th, at which time it went entirely offline and remains offline as of the writing of this update.

Mike J+

Wednesday, August 15, 2012

info from brief resumptions of communications

In the last few days, from August 10th - 13th, there have been four brief periods when communications with the Saipan station have resumed.  This post explains what we have learned from the existence and the contents of those communications.

First let's look at the timing and duration of these periods, speaking in local Saipan time:
  • Friday, August 10th, 7:18 am - 7:42 am (5 records)
  • Saturday, August 11th, 1:30 pm - 4:48 pm (34 records)
  • Sunday, August 12th, 11:24 am - 11:30 am (2 records)
  • Monday, August 13th, 9:42 am - 1:54 pm (33 records)
 The record counts I've listed are from the 6-minute data table.

First of all, note that every record in a data table is given a sequential record number.  This makes it possible to identify cases where records are (or are not) consecutive.  Because of this we can say with high probability that the station's datalogger was completely non-functional from the period from July 19th to August 9th (with times in UTC).  There is no chance that this could be yet another communications-only failure, with little impact otherwise to station operations.

The pattern of communications is somewhat consistent with the explanation that, following a severe power loss that to some extent drained the station's rechargeable batteries, the station may be recharging itself and may briefly resume operations during daylight hours.  However there is still no explanation for the initial power loss, or for the previous power drops (May 19th - June 4th, June 26th - July 5th) seen in the data record.

Perhaps worse, this pattern suggests that the intermittent voltage drop may not be over.  Normally if a short-circuit is repaired we would expect to see better and longer "ontimes" with each passing day.  Instead we start with a brief uptime in the early morning (followed by silence during that day's prime daylight hours).  We also see a stronger performance Saturday followed by a weaker performance Sunday.  Monday's communications are longer but they describe power levels that are getting lower throughout the morning and early afternoon.  And on Tuesday, which has already ended in Saipan, there was no resumption of communications at all.

Another problem is that many of the station's instruments are now malfunctioning.  This may be due to electrical problems (an artifact of running them at very low levels) or their calibration files and settings may have become corrupted, leading them to produce reports in a format that the datalogger program was not designed to parse.  A brief rundown of the state of station instruments follows:

The standalone air temperature sensor, barometer, anemometer and electronic compass all appear to be working normally.  These are all analog instruments and do not depend on serial communications in any way.

Both light sensors are damaged.  The surface light sensor continues to produce serial reports of some kind (as evidenced by that sensor's instrument "counts" in the logger) but these reports are apparently filled only with zeroes, day or night, including for temperature and voltage.  The underwater light sensor has been offline since last October and this has not changed.

The Deep CTD (Teledyne) seems to be at least partially operational.  Its conductivity and temperature readings seem reasonable, although its depth reading show an odd 30-cm shift in the past few days and may indicate a problem.

The PacIOOS CTD was producing data reports on Friday and Saturday but since that time its output has been in a format that was unrecognized by the datalogger programming.  It produced a full "status" report (in response to hourly prompting by the datalogger) on August 11th, 2012, at 4:02 UTC.  This report's contents were as follows:
  • Year: 2012
  • Month: 8
  • Day: 11
  • Hour: 4
  • Minute: 2
  • Second: 56
  • Serial Num: 1606481
  • Num Events: 15
  • Volts Main: 7.3
  • Volts Lith: 8
  • Curr Main: 61.3
  • Curr Pump: 283.4
  • Curr Ext: 286.8
  • Mem Bytes: 1082107
  • Samples: 56953
  • Sample Free: 3406107
  • Sample Len: 19
  • Headers: 4
The Vaisala WXT, like the surface light sensor, is apparently producing reports but as recorded by the datalogger these reports are all zeroes.

It is possible that there has been damage to the datalogger, memory unit, serial port units, radio or cellular modem, although so far there is no sign of such damage.

The main problem at this point is not the instrument failures but that of isolating the cause of these voltage drops.  It seems like there have been voltage drops since mid-May, that a severe voltage drop has rendered the station non-functional for three weeks, and that this may be an intermittent problem that is still ongoing.  If we knew or suspected the cause of the power issues then it would simply be a matter of replacing the station instruments with the spares in storage at CRM.  However our first focus must be on diagnosing the underlying cause of the power losses and then repairing it.

Mike J+

Tuesday, August 7, 2012

Maintenance log: Launched CRM vessel from shore

[From David Benavente's LAOLAO Bay ICON Station Maintenance log -- August 6, 2012:]

Launched CRM vessel from shore. Station was climbed by David B. Upon opening the brain housing all wires and connection plugs were first inspected. No sign of damage was found. Next, Brain hardware was visually inspected. Data logger lights, modem lights, and power supply lights were all illuminated. The inspection did not reveal any wiring problems to the brain.
Underwater cleaning and maintenance of station instruments was also conducted, during this visit.